ProFound Therapeutics founding team

Flag­ship's lat­est biotech could turn some of the thou­sands of new pro­teins it dis­cov­ered in­to ther­a­pies — and it has $75M to start

Flag­ship Pi­o­neer­ing, the in­cu­ba­tor of Mod­er­na and dozens of oth­er biotechs, says it has land­ed up­on tens of thou­sands of pre­vi­ous­ly undis­cov­ered hu­man pro­teins. The VC shop wants to po­ten­tial­ly turn them in­to ther­a­peu­tics.

Like oth­er drug de­vel­op­ers that have turned pro­teins in­to ther­a­peu­tics (think in­sulin for di­a­betes), Flag­ship’s lat­est cre­ation, Pro­Found Ther­a­peu­tics, wants to tap in­to this new trove of pro­teins as part of its mis­sion to treat in­di­ca­tions rang­ing from rare dis­eases to can­cer to im­muno­log­i­cal dis­eases.

The turn of the cen­tu­ry brought about the Hu­man Genome Project, which re­vealed 20,000 pro­tein-cod­ing genes, and then years lat­er, it was found that the re­gions be­tween genes might play an ac­tive role in pro­duc­ing RNA.

“But, yet again, some­what sim­i­lar­ly to what hap­pened af­ter the Genome Project, every­one looked at those things and said [it’s] ‘maybe junk, maybe in­volved in reg­u­la­tion of the cell. We don’t know what these things do, but they don’t code for pro­teins,'” Pro­Found CEO Avak Kahve­jian told End­points News.

Avak Kahve­jian

Flag­ship wasn’t sat­is­fied with those mus­ings, so the life sci­ences gi­ant asked whether some RNA species could ac­tu­al­ly turn in­to pro­tein, and the an­swer was re­sound­ing­ly yes.

Now, Pro­Found is emerg­ing from stealth af­ter al­most two years with­in the walls of Flag­ship, which is fu­el­ing the up­start with $75 mil­lion and 25 em­ploy­ees to kick every­thing in­to gear.

“It is an ex­pan­sion of the dog­ma that you get one pro­tein for one tran­script from one gene. In some re­spects, it is a change in our dog­ma that we on­ly have 20,000 pro­tein-cod­ing genes and their vari­ants,” Kahve­jian said. “We do think it’s quite a pro­found area of work, but not nec­es­sar­i­ly ex­clu­sive­ly our do­main, but one that the en­tire com­mu­ni­ty can be in­ter­est­ed in and ben­e­fit from.”

Aside from ex­plor­ing whether the pro­teins them­selves could be used as a ther­a­peu­tic, Pro­Found will test whether the pro­teins could be in­flu­en­tial in small mol­e­cules, an­ti­bod­ies, nu­cle­ic acid med­i­cines, mR­NA and gene ther­a­pies, Kahve­jian said.

A decade-long part­ner and gen­er­al part­ner at Flag­ship, Kahve­jian has served as the ini­tial CEO be­hind many of the in­cu­ba­tor’s spin­outs, in­clud­ing Laronde, Cel­lar­i­ty, Ring Ther­a­peu­tics, Gen­er­ate Bio­med­i­cines, Cyg­nal Ther­a­peu­tics and Ru­bius Ther­a­peu­tics.

He’s brought many of his Flag­ship peers on­to the lead­er­ship team, in­clud­ing Kala Sub­ra­man­ian as pres­i­dent, Er­i­ca We­in­stein as head of re­search and Vi­ni Mani as head of plat­form.

Image courtesy of The Janssen Pharmaceutical Companies of Johnson & Johnson.

Pro­tect­ing the glob­al phar­ma­ceu­ti­cal in­no­va­tion ecosys­tem – what’s at stake?

We are living in a new era of healthcare that is rapidly advancing progress impacting patient outcomes and experiences. We’ve seen a remarkable pace of transformational innovation, applied research, and advanced clinical development over the last decade.

Despite this tremendous progress, there is much more work to be done, and patients are counting on us – now more than ever – to continue that momentum. At the heart of our industry is a focus on developing and delivering medicines for some of the world’s most challenging diseases, including those that have few or no effective treatments today.

The Modulo Bio team with CEO Michael Horowitz (fourth from right in semicircle)

Ex­clu­sive: With $8M, neu­ro start­up Mod­u­lo Bio emerges to test small mol­e­cules for ALS, de­men­tia in CEO’s per­son­al mis­sion

Embarking on a personal mission after his best friend’s mother was diagnosed with a mutation-driven case of frontotemporal dementia, Michael Horowitz has pulled together $8 million in venture funding at Modulo Bio to create small molecules for neurodegenerative diseases.

The San Diego and Bay Area biotech will select its lead development candidate and some backup options within six months and then raise a Series A to investigate therapeutics for C9orf72 mutation-driven cases of ALS and frontotemporal dementia, Horowitz told Endpoints News.

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Roger Perlmutter, Eikon Therapeutics CEO

Roger Perl­mut­ter builds Eikon's pipeline with deal-mak­ing flur­ry, rais­ing $106M more

Eikon Therapeutics announced three business development deals on Thursday, effectively dropping in a pipeline of cancer drugs alongside more than $100 million in fresh funding.

The Hayward, CA-based company has become one of biotech’s richest startups since its 2019 founding, having raised nearly $775 million. It’s developing a massive, automated research approach built around Nobel Prize-winning microscope science to peer inside cells and watch proteins in action. After its Series B last year, PitchBook reported a $3.02 billion valuation. And while CEO Roger Perlmutter declined to comment on that figure, he said its first tranche of nearly $106 million in Series C funding is a “meaningful step-up to our Series B valuation.”

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Eu­ro­pean Par­lia­ment calls mem­ber states to ac­tion on an­timi­cro­bial re­sis­tance

Members of the European Parliament have called on EU countries to develop national action plans against antimicrobial resistance (AMR), calling it a top-three priority health threat.

Parliament on Thursday announced recommendations for the fight against AMR, including national action plans that must be updated at least every two years, an EU-level database tracking AMR and antimicrobial use and increased partnership between the pharma industry, patient groups and academia.

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Roche plans to di­vest from lega­cy Genen­tech man­u­fac­tur­ing fa­cil­i­ty in Cal­i­for­nia

Roche is planning to make some changes to its subsidiary’s manufacturing network in California.

The Swiss pharma announced Wednesday that it plans to divest from Genentech’s manufacturing facility in Vacaville, CA, around 58 miles northeast of San Francisco. According to a statement from Roche, the move is part of a “broader strategy” to bring its manufacturing capabilities in line with its future pipeline. Roche is starting the process of finding a buyer for the site but has not named any candidates yet.

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Peter van de Sande, Synaffix CEO

Lon­za shells out $107M cash to snap up Synaf­fix and its ADC plat­form

After lining up a string of partnerships over the years, Dutch antibody-drug conjugate specialist Synaffix has found a new home: Lonza, the contract development and manufacturing giant.

Lonza is paying about $107 million (€100 million) in cash to acquire Synaffix, with up to $64 million (€60 million) in “additional performance-based consideration” on the table. Synaffix’s ADC tech platform will now become part of Lonza’s offering for biopharma clients, lending its bioconjugate technologies to not just ADCs but also targeted gene therapy, immune cell engagers and other applications.

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Who's con­fi­dent­ly in­vest­ing in biotech star­tups dur­ing these tense days? We've got some an­swers

We’ve got a changeup to our event schedule in Boston next week, where we’ll be doing a mix of live/streaming events at our base at The Seaport Hotel as part of a two-day lineup of webinars, virtual firesides and a cocktail hour Q&A with a veteran of the biotech financing scene.

The 9:30-10:30 am ET live slot on Tuesday, June 6, will now feature a panel conversation on the current state of affairs for VC investing in biotech, focusing on what startups are getting cash — and how. Alaa Halawa, head of US ventures at Mubadala, is confirmed, along with Brian Goodman at MPM and Geoff von Maltzahn, a general partner at Moderna-buoyed Flagship. I have a couple of other invites out and will let you know how that plays out.

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Albert Bourla, Pfizer CEO (Michel Euler/AP Images, Pool)

FDA ap­proves Pfiz­er’s RSV shot for old­er adults, tee­ing up a com­pet­i­tive $17B vac­cine mar­ket

The FDA approved Pfizer’s RSV vaccine called Abrysvo for older adults on Wednesday, placing another Big Pharma onto the commercial stage ahead of the next RSV season.

Pfizer’s approval comes weeks after GSK won approval for its rival shot, Arexvy. Those two vaccines are both approved for use in adults 60 years and older and will be reviewed by a CDC panel in June before they’re expected to commercially launch this fall. Wall Street analysts see RSV as the next multibillion-dollar vaccine market, with Jefferies analysts recently forecasting the RSV market will grow to $17 billion over the next decade.

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Richard Pazdur, FDA's OCE director (Flatiron Health via YouTube)

FDA's can­cer chief weighs in on com­mon chemo short­ages — re­port

Richard Pazdur, director of the FDA’s Oncology Center of Excellence, attributes the current shortage of two cancer drugs to drug companies that haven’t invested in building out their production capacity.

In an interview with The Cancer Letter, a weekly cancer publication, Pazdur said that the current shortages of cisplatin and carboplatin, a pair of drugs used to treat a wide range of cancer patients, are the result of two problems: manufacturers not investing in enhancing production capacity, and drug companies being dependent on one supplier of raw ingredients. The cisplatin shortage followed an inspection that revealed quality issues at a manufacturing facility, which then led to the shutdown of production. This led to a surge in carboplatin demand, creating a secondary shortage.

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